Benefits
- High-quality data
- Consultations with PhD-level NGS experts
- Non-standard applications, full flexibility
- State-of-the-art sequencing platforms by Illumina and Element Bioscience (AVITI)
Deliverables
- Raw FASTQ files
- FastQC/MultiQC reports
- Trimmed FASTQ files (upon request)
- .BAM files (reference genome alignments)
- .BW coverage files (.e.g. for IGV/other genome browser uploads)
- Alignment summary metrics (mismatches, indels computed with Picard tools)
- Target regions coverage as text files and figures
- Deliverables summarized in a PDF report
Applications
- Whole-genome sequencing
- Exome sequencing
- Target enrichment
- Amplicon sequencing
Resources
General Services Documents
Sample submission
Consultations
- Together we will identify the best experimental design for your project.
- Shipment support (such as help with customs and export documents), or organizing the shipment under certain conditions.
Sample Extraction
- RNA extraction from tissues, cells, and biofluids.
- Challenging samples such as FFPE curls, microdissections, plant tissues and similar.
- Sample QC included.
Library Preparation
- Various library preparation solutions, depending on and adapted to your specific experimental objectives.
- Library QC included.
Sequencing
- Read mode and read depth most suitable for your application.
Data Analysis and Report
- Data quality control.
- Data analysis in-house.
- Standard data analysis options, on-demand, custom-design data analyses, and custom pipeline development.
Working with us
We offer different NGS Services packages. You can send us samples from which we will extract RNA (Start from Extraction) or purified RNA (Start from Library Prep). It is also possible to do “Sequencing only” projects of your prepared and pooled libraries, all library types are expected. Each service package can be further customized based on your sample type and requirements. Data Analysis is offered for each of our NGS services packages or as a service on its own (Lexogen Bioinformatics Services). We are also specialized in Custom Bioinformatics Solutions, e.g., for new pipeline developments.